| 4.3.20172017-3-4 17:00:00 | 17:00 | Premier League | 18. R | Tom Tomsk - FC Rostov | -:- |
| 5.12.20162016-12-5 11:00:00 | 11:00 | Premier League | 17. R | FC Ufa - Tom Tomsk | -:- |
| 1.12.20162016-12-1 17:30:00 | 17:30 | Premier League | 16. R | Tom Tomsk - Lokomotive Moskau | 1:6 (0:0) |
| 27.11.20162016-11-27 12:00:00 | 12:00 | Premier League | 15. R | Krylya Sovetov Samara - Tom Tomsk | 3:0 (1:0) |
| 21.11.20162016-11-21 17:00:00 | 17:00 | Premier League | 14. R | Terek Grosny - Tom Tomsk | 0:0 (0:0) |
| 5.11.20162016-11-5 9:00:00 | 9:00 | Premier League | 13. R | Tom Tomsk - Spartak Moskau | 0:1 (0:1) |
| 30.10.20162016-10-30 15:00:00 | 15:00 | Premier League | 12. R | Zenit St. Petersburg - Tom Tomsk | 1:0 (1:0) |
| 22.10.20162016-10-22 11:05:00 | 11:05 | Premier League | 11. R | Tom Tomsk - Anschi Machatschkala | 0:3 (0:0) |
| 8.12.20162016-12-8 21:05:00 | 21:05 | Europa League Grp. I | 6. R | OGC Nizza - FC Krasnodar | -:- |
| 5.12.20162016-12-5 17:00:00 | 17:00 | Premier League | 17. R | FC Krasnodar - Krylya Sovetov Samara | -:- |
| 1.12.20162016-12-1 16:00:00 | 16:00 | Premier League | 16. R | Terek Grosny - FC Krasnodar | 2:1 (2:0) |
| 27.11.20162016-11-27 17:00:00 | 17:00 | Premier League | 15. R | FC Krasnodar - Zenit St. Petersburg | 2:1 (0:0) |
| 24.11.20162016-11-24 19:00:00 | 19:00 | Europa League Grp. I | 5. R | FC Krasnodar - Salzburg | 1:1 (0:1) |
| 20.11.20162016-11-20 12:30:00 | 12:30 | Premier League | 14. R | FC Krasnodar - Ural | 3:0 (0:0) |
| 6.11.20162016-11-6 17:30:00 | 17:30 | Premier League | 13. R | FC Krasnodar - Gazovik Orenburg | 3:3 (2:3) |
| 3.11.20162016-11-3 21:05:00 | 21:05 | Europa League Grp. I | 4. R | Schalke 04 - FC Krasnodar | 2:0 (2:0) |