| 13.12.20162016-12-13 20:45:00 | 20:45 | FA Cup | 2. R | Milton Keynes Dons - Charlton Athletic | -:- |
| 3.12.20162016-12-3 16:00:00 | 16:00 | FA Cup | 2. R | Charlton Athletic - Milton Keynes Dons | 0:0 (0:0) |
| 8.11.20162016-11-8 20:45:00 | 20:45 | EFL Trophy Southern Group E | 3. R | Colchester United - Charlton Athletic | 5:4 (1:1) |
| 5.11.20162016-11-5 16:00:00 | 16:00 | FA Cup | 1. R | Charlton Athletic - Scunthorpe United | 3:1 (2:0) |
| 4.10.20162016-10-4 20:45:00 | 20:45 | EFL Trophy Southern Group E | 2. R | Charlton Athletic - Crawley Town | 0:2 (0:1) |
| 30.8.20162016-8-30 20:45:00 | 20:45 | EFL Trophy Southern Group E | 1. R | Charlton Athletic - Southampton Academy | 5:4 (0:0) |
| 9.8.20162016-8-9 20:45:00 | 20:45 | EFL Cup | 1. R | Cheltenham Town - Charlton Athletic | 1:0 (1:0) |
| 20.9.20162016-9-20 20:45:00 | 20:45 | EFL Cup | 3. R | Leeds United - Blackburn Rovers | 1:0 (0:0) |
| 23.8.20162016-8-23 20:45:00 | 20:45 | EFL Cup | 2. R | Blackburn Rovers - Crewe Alexandra | 4:3 (1:2) |
| 9.8.20162016-8-9 20:45:00 | 20:45 | EFL Cup | 1. R | Mansfield Town - Blackburn Rovers | 1:3 (0:1) |
| 21.2.20162016-2-21 15:00:00 | 15:00 | FA Cup | 5. R | Blackburn Rovers - West Ham United | 1:5 (1:2) |
| 30.1.20162016-1-30 16:00:00 | 16:00 | FA Cup | 4. R | Oxford United - Blackburn Rovers | 0:3 (0:2) |
| 18.1.20162016-1-18 20:15:00 | 20:15 | FA Cup | 3. R | Newport County - Blackburn Rovers | 1:2 (1:1) |