| 6.11.20162016-11-6 15:00:00 | 15:00 | FA Cup | 1. R | Hartlepool United - Stamford AFC | 3:0 (0:0) |
| 29.10.20162016-10-29 16:00:00 | 16:00 | FA Trophy Qualification | 2. R | Stamford AFC - Hednesford | 1:4 (1:1) |
| 18.10.20162016-10-18 20:45:00 | 20:45 | FA Cup Qualification | 4. R | Wrexham - Stamford AFC | 2:3 |
| 15.10.20162016-10-15 16:00:00 | 16:00 | FA Cup Qualification | 4. R | Stamford AFC - Wrexham | 1:1 |
| 8.10.20162016-10-8 16:00:00 | 16:00 | FA Trophy Qualification | 1. R | Stamford AFC - Basford United | 1:0 |
| 1.10.20162016-10-1 16:00:00 | 16:00 | FA Cup Qualification | 3. R | AFC Mansfield - Stamford AFC | 1:2 |
| 15.11.20162016-11-15 20:45:00 | 20:45 | FA Trophy Qualification | 3. R | St Neots Town - Marine | 2:4 (1:1) |
| 12.11.20162016-11-12 16:00:00 | 16:00 | FA Trophy Qualification | 3. R | Marine - St Neots Town | 1:1 (0:0) |
| 29.10.20162016-10-29 16:00:00 | 16:00 | FA Trophy Qualification | 2. R | Bedworth United - St Neots Town | 2:3 (2:2) |
| 6.9.20162016-9-6 20:45:00 | 20:45 | FA Cup Qualification | 1. R | Stamford AFC - St Neots Town | 4:1 |
| 3.9.20162016-9-3 16:00:00 | 16:00 | FA Cup Qualification | 1. R | St Neots Town - Stamford AFC | 1:1 |
| 14.11.20152015-11-14 16:00:00 | 16:00 | FA Trophy Qualification | 2. R | St Neots Town - Hungerford Town | 1:2 |