| 4.8.20162016-8-4 19:00:00 | 19:00 | Europa League Qualification | 3. R | AIK Solna - Panathinaikos | 0:2 (0:0) |
| 28.7.20162016-7-28 20:00:00 | 20:00 | Europa League Qualification | 3. R | Panathinaikos - AIK Solna | 1:0 (0:0) |
| 21.7.20162016-7-21 19:00:00 | 19:00 | Europa League Qualification | 2. R | Europa FC - AIK Solna | 0:1 (0:0) |
| 14.7.20162016-7-14 19:00:00 | 19:00 | Europa League Qualification | 2. R | AIK Solna - Europa FC | 1:0 (0:0) |
| 7.7.20162016-7-7 19:30:00 | 19:30 | Europa League Qualification | 1. R | Bala Town - AIK Solna | 0:2 (0:2) |
| 30.6.20162016-6-30 18:30:00 | 18:30 | Europa League Qualification | 1. R | AIK Solna - Bala Town | 2:0 (1:0) |
| 8.12.20162016-12-8 21:05:00 | 21:05 | Europa League Grp. G | 6. R | Panathinaikos - Celta Vigo | -:- |
| 24.11.20162016-11-24 19:00:00 | 19:00 | Europa League Grp. G | 5. R | Ajax - Panathinaikos | 2:0 (1:0) |
| 3.11.20162016-11-3 21:05:00 | 21:05 | Europa League Grp. G | 4. R | Panathinaikos - Standard Lüttich | 0:3 (0:0) |
| 20.10.20162016-10-20 19:00:00 | 19:00 | Europa League Grp. G | 3. R | Standard Lüttich - Panathinaikos | 2:2 (1:2) |
| 29.9.20162016-9-29 19:00:00 | 19:00 | Europa League Grp. G | 2. R | Celta Vigo - Panathinaikos | 2:0 (0:0) |
| 15.9.20162016-9-15 21:05:00 | 21:05 | Europa League Grp. G | 1. R | Panathinaikos - Ajax | 1:2 (1:1) |
| 25.8.20162016-8-25 19:00:00 | 19:00 | Europa League Qualification | Finale | Broendby IF - Panathinaikos | 1:1 (1:0) |