| 21.7.20162016-7-21 20:00:00 | 20:00 | Europa League Qualification | 2. R | KF Shkendija - FK Neftchi | 1:0 (1:0) |
| 14.7.20162016-7-14 17:55:00 | 17:55 | Europa League Qualification | 2. R | FK Neftchi - KF Shkendija | 0:0 (0:0) |
| 7.7.20162016-7-7 18:00:00 | 18:00 | Europa League Qualification | 1. R | FK Neftchi - Balzan FC | 1:2 (1:0) |
| 30.6.20162016-6-30 18:00:00 | 18:00 | Europa League Qualification | 1. R | Balzan FC - FK Neftchi | 0:2 (0:1) |
| 9.7.20152015-7-9 20:30:00 | 20:30 | Europa League Qualification | 1. R | Mladost Podgorica - FK Neftchi | 1:1 (0:0) |
| 2.7.20152015-7-2 18:00:00 | 18:00 | Europa League Qualification | 1. R | FK Neftchi - Mladost Podgorica | 2:2 (1:1) |
| 10.12.20152015-12-10 21:05:00 | 21:05 | Europa League Grp. H | 6. R | Skenderbeu - Lokomotive Moskau | 0:3 (0:1) |
| 26.11.20152015-11-26 19:00:00 | 19:00 | Europa League Grp. H | 5. R | Besiktas - Skenderbeu | 2:0 (1:0) |
| 5.11.20152015-11-5 21:05:00 | 21:05 | Europa League Grp. H | 4. R | Skenderbeu - Sporting Lissabon | 3:0 (2:0) |
| 22.10.20152015-10-22 19:00:00 | 19:00 | Europa League Grp. H | 3. R | Sporting Lissabon - Skenderbeu | 5:1 (2:0) |
| 1.10.20152015-10-1 19:00:00 | 19:00 | Europa League Grp. H | 2. R | Lokomotive Moskau - Skenderbeu | 2:0 (1:0) |
| 17.9.20152015-9-17 21:05:00 | 21:05 | Europa League Grp. H | 1. R | Skenderbeu - Besiktas | 0:1 (0:1) |