| 4.8.20162016-8-4 18:30:00 | 18:30 | Europa League Qualification | 3. R | FC Krasnodar - Birkirkara | 3:1 (3:0) |
| 28.7.20162016-7-28 19:30:00 | 19:30 | Europa League Qualification | 3. R | Birkirkara - FC Krasnodar | 0:3 (0:1) |
| 21.7.20162016-7-21 21:00:00 | 21:00 | Europa League Qualification | 2. R | Hearts - Birkirkara | 1:2 (0:0) |
| 14.7.20162016-7-14 20:30:00 | 20:30 | Europa League Qualification | 2. R | Birkirkara - Hearts | 0:0 (0:0) |
| 5.7.20162016-7-5 17:45:00 | 17:45 | Europa League Qualification | 1. R | Birkirkara - Siroki Brijeg | 2:0 (1:0) |
| 30.6.20162016-6-30 19:00:00 | 19:00 | Europa League Qualification | 1. R | Siroki Brijeg - Birkirkara | 1:1 (1:1) |
| 25.8.20162016-8-25 20:15:00 | 20:15 | Europa League Qualification | Finale | NK Maribor - FK Qabala | 1:0 (0:0) |
| 18.8.20162016-8-18 19:00:00 | 19:00 | Europa League Qualification | Finale | FK Qabala - NK Maribor | 3:1 (1:1) |
| 4.8.20162016-8-4 20:15:00 | 20:15 | Europa League Qualification | 3. R | NK Maribor - Aberdeen | 1:0 (0:0) |
| 28.7.20162016-7-28 20:45:00 | 20:45 | Europa League Qualification | 3. R | Aberdeen - NK Maribor | 1:1 (0:0) |
| 21.7.20162016-7-21 19:00:00 | 19:00 | Europa League Qualification | 2. R | Levski Sofia - NK Maribor | 1:1 (1:0) |
| 14.7.20162016-7-14 20:00:00 | 20:00 | Europa League Qualification | 2. R | NK Maribor - Levski Sofia | 0:0 (0:0) |